Yes, all puppies will have a Microchip. You will receive the enrollment information with your puppy.
In the past we were utilizing AKC Reunite microchips which required an additional one-time fee to register. Sadly, a couple of puppies that we housed ended up missing while they did not have the microchips registered.
To resolve, we switched to Fi Nano microchips which are hassle free, no cost to register and update for life using a computer or phone.